EpiStruct

Mathematical routines for epidemic modelling and inference in structured populations.

This is the web site for the EpiStruct project. We are actively developing a more comprehensive open-source package, but for the moment this site provides links to the code developed in three open-access peer-reviewed publications

• A. Black, T. House, M.J Keeling, and J. V. Ross, "Epidemiological consequences of household-based antiviral prophylaxis for pandemic influenza," Journal of the Royal Society Interface 10:81 (2013) 20121019. [PAPER] [CODE]
• T. House, J. V. Ross and D. Sirl, "How big is an outbreak likely to be? Methods for epidemic final-size calculation," Proceedings of the Royal Society A 469:2150 (2013) 20120436. [PAPER] [CODE]
• J. V. Ross, T. House and M. J. Keeling, "Calculation of disease dynamics in a population of households," PLoS ONE 5:3 (2010) e9666. [PAPER] [CODE]

We would encourage anyone interested in making use of or developing this code to contact one of the development team:

• Josh Ross, University of Adelaide;
• Andrew Black, University of Adelaide;
• Thomas House, University of Warwick;
• Matt Keeling, University of Warwick.